MolNFT v1 · #163882 · protein
Molecular insight into a new low affinity xylan binding module CBM86, from the xylanolytic gut symbiont roseburia intestinalis.
6SGF: “Molecular insight into a new low affinity xylan binding module CBM86, from the xylanolytic gut symbiont…”. X-ray diffraction, 3 ligands (XYP, CD, CL). MolNFT v1 #163882 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6SGF
- Type
- protein
- Length
- 786 residues
- Chains
- 6
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- C7G9B5
- Ligands
- XYP, CD, CL
Structure
x-ray diffraction · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 129 | — | C7G9B5 |
| B, E | — | protein | 132 | — | C7G9B5 |
| C, F | — | protein | 131 | — | C7G9B5 |
| D | — | protein | 131 | — | C7G9B5 |
Ligands and binding sites
- XYP · beta-D-xylopyranose · sugar · 24 copies · chains A, B, C, D, E, F
- CD · Cadmium ion · metal · 10 copies · chains A, B, C, E, F, D
- CL · Chloride ion · ion · 8 copies · chains A, B, C, D, E, F
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6SGF · Molecular insight into a new low affinity xylan binding module CBM86, from the… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt C7G9B5
- Elsewhere: RCSB PDB 6SGF · PDBe 6SGF · UniProt C7G9B5
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