MolNFT v1 · #163637 · protein
Crystal structure of cytochrome C in complex with a sulfonated quinoline-derived foldamer
6S8Y: “Crystal structure of cytochrome C in complex with a sulfonated quinoline-derived foldamer”. X-ray diffraction, 3 ligands (L0T, HEC, ZN). MolNFT v1 #163637 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6S8Y
- Type
- protein
- Length
- 107 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P00044
- Ligands
- L0T, HEC, ZN
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 107 | — | P00044 |
Ligands and binding sites
- L0T · 8-acetamido-2-[[2-[[2-[[2-[[2-[[2-[[2-[(2-carboxy-4-sulfonato-quinolin-8-yl)carbamoyl]-4-sulfonato-quinolin-8-yl]carbamoyl]-4-sulfonato-quinolin-8-yl]carbamoyl]-4-sulfonato-quinolin-8-yl]carbamoyl]-4-sulfonato-quinolin-8-yl]carbamoyl]-4-sulfonato-quinolin-8-yl]carbamoyl]-4-sulfonato-quinolin-8-yl]carbamoyl]quinoline-4-sulfonate · ligand · 2 copies · chains A
- HEC · Heme C · ligand · chains A
- ZN · Zinc ion · metal · 3 copies · chains A
- ACT · Acetate ion · additive · 2 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6S8Y · Crystal structure of cytochrome c in complex with a sulfonated quinoline-derived foldamer · the same entry in another collection · chain A against A, TM-score 1.00
- P00044 · AlphaFold monomer V2.0 prediction for cytochrome C isoform 1 (P00044) · a predicted model of the same protein · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P00044
- Elsewhere: RCSB PDB 6S8Y · PDBe 6S8Y · UniProt P00044
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