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MolNFT v1 · #163637 · protein

Crystal structure of cytochrome C in complex with a sulfonated quinoline-derived foldamer

6S8Y: “Crystal structure of cytochrome C in complex with a sulfonated quinoline-derived foldamer”. X-ray diffraction, 3 ligands (L0T, HEC, ZN). MolNFT v1 #163637 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
6S8Y
Type
protein
Length
107 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
P00044
Ligands
L0T, HEC, ZN

Structure

x-ray diffraction · 1 distinct chain.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein107—P00044

Ligands and binding sites

  • L0T · 8-acetamido-2-[[2-[[2-[[2-[[2-[[2-[[2-[(2-carboxy-4-sulfonato-quinolin-8-yl)carbamoyl]-4-sulfonato-quinolin-8-yl]carbamoyl]-4-sulfonato-quinolin-8-yl]carbamoyl]-4-sulfonato-quinolin-8-yl]carbamoyl]-4-sulfonato-quinolin-8-yl]carbamoyl]-4-sulfonato-quinolin-8-yl]carbamoyl]-4-sulfonato-quinolin-8-yl]carbamoyl]quinoline-4-sulfonate · ligand · 2 copies · chains A
  • HEC · Heme C · ligand · chains A
  • ZN · Zinc ion · metal · 3 copies · chains A
  • ACT · Acetate ion · additive · 2 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 6S8Y · Crystal structure of cytochrome c in complex with a sulfonated quinoline-derived foldamer · the same entry in another collection · chain A against A, TM-score 1.00
  • P00044 · AlphaFold monomer V2.0 prediction for cytochrome C isoform 1 (P00044) · a predicted model of the same protein · chain A against A, TM-score 1.00

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