MolNFT v1 · #163465 · protein
P46, an immunodominant surface protein from mycoplasma hyopneumoniae
6S3T: “P46, an immunodominant surface protein from mycoplasma hyopneumoniae”. X-ray diffraction, 2 ligands (XYP, NA). MolNFT v1 #163465 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6S3T
- Type
- protein
- Length
- 3,235 residues
- Chains
- 12
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P0C0J8
- Ligands
- XYP, NA
Structure
x-ray diffraction · 5 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | — | protein | 374 | — | P0C0J8 |
| C, I, M, Q | — | protein | 216 | — | — |
| D, E, N, R | — | protein | 219 | — | — |
| S | — | protein | 373 | — | P0C0J8 |
| T | — | protein | 374 | — | P0C0J8 |
Ligands and binding sites
- XYP · beta-D-xylopyranose · sugar · 4 copies · chains A, B, S, T
- NA · Sodium ion · metal · 4 copies · chains A, B, S, T
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6S3T · P46, an immunodominant surface protein from Mycoplasma hyopneumoniae · the same entry in another collection · chain Q against Q, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0C0J8
- Elsewhere: RCSB PDB 6S3T · PDBe 6S3T · UniProt P0C0J8
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