MolNFT v1 · #162980 · protein
Crystal structure of monocarboxylated hemoglobin from the sub- antarctic fish eleginops maclovinus
6RP5: “Crystal structure of monocarboxylated hemoglobin from the sub- antarctic fish eleginops maclovinus”. X-ray diffraction, 5 ligands (HEM, ACE, DTN). MolNFT v1 #162980 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6RP5
- Type
- protein
- Length
- 286 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- K7N5M5, K7N5M6
- Ligands
- HEM, ACE, DTN, SO4, CMO
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 142 | — | K7N5M5 |
| B | — | protein | 144 | — | K7N5M6 |
Ligands and binding sites
- HEM · Protoporphyrin IX containing Fe · ligand · 2 copies · chains A, B
- ACE · Acetyl group · ligand · chains A
- DTN · Dithionite · ligand · chains A
- SO4 · Sulfate ion · ion · 4 copies · chains A, B
- CMO · Carbon monoxide · ion · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6RP5 · Crystal structure of monocarboxylated hemoglobin from the sub-Antarctic fish Eleginops… · the same entry in another collection · chain A against A, TM-score 1.00
- K7N5M6 · AlphaFold monomer V2.0 prediction for hemoglobin subunit beta-1 (K7N5M6) · a predicted model of the same protein · chain B against A, TM-score 0.97
- K7N5M5 · AlphaFold monomer V2.0 prediction for hemoglobin subunit alpha 1 (K7N5M5) · a predicted model of the same protein · chain A against A, TM-score 0.93
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt K7N5M5
- Every structure of UniProt K7N5M6
- Elsewhere: RCSB PDB 6RP5 · PDBe 6RP5 · UniProt K7N5M5 · UniProt K7N5M6
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