GL1X · GenesisL1 explorer

MolNFT v1 · #162980 · protein

Crystal structure of monocarboxylated hemoglobin from the sub- antarctic fish eleginops maclovinus

6RP5: “Crystal structure of monocarboxylated hemoglobin from the sub- antarctic fish eleginops maclovinus”. X-ray diffraction, 5 ligands (HEM, ACE, DTN). MolNFT v1 #162980 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
6RP5
Type
protein
Length
286 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
K7N5M5, K7N5M6
Ligands
HEM, ACE, DTN, SO4, CMO

Structure

x-ray diffraction · 2 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein142—K7N5M5
B—protein144—K7N5M6

Ligands and binding sites

  • HEM · Protoporphyrin IX containing Fe · ligand · 2 copies · chains A, B
  • ACE · Acetyl group · ligand · chains A
  • DTN · Dithionite · ligand · chains A
  • SO4 · Sulfate ion · ion · 4 copies · chains A, B
  • CMO · Carbon monoxide · ion · 2 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 6RP5 · Crystal structure of monocarboxylated hemoglobin from the sub-Antarctic fish Eleginops… · the same entry in another collection · chain A against A, TM-score 1.00
  • K7N5M6 · AlphaFold monomer V2.0 prediction for hemoglobin subunit beta-1 (K7N5M6) · a predicted model of the same protein · chain B against A, TM-score 0.97
  • K7N5M5 · AlphaFold monomer V2.0 prediction for hemoglobin subunit alpha 1 (K7N5M5) · a predicted model of the same protein · chain A against A, TM-score 0.93

Analyse

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.