MolNFT v1 · #162774 · protein
C-terminal domain of tssa protein from T6SS of vibrio cholerae.
6RIU · Type VI secretion system protein tssa: “C-terminal domain of tssa protein from T6SS of vibrio cholerae.”. Electron microscopy, 3 pockets (best druggability 0.59). MolNFT v1 #162774 on GenesisL1: 3D structure, binding sites and…
- PDB
- 6RIU
- Type
- protein
- Length
- 182 residues
- Chains
- 2
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Type VI secretion system protein tssa
- UniProt
- A0A023PTF2
- Pockets
- 3 · best druggability 0.59
Structure
electron microscopy · 1 distinct chain · 76% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Type VI secretion system protein tssa | protein | 91 | 76% helix, 0% strand | A0A023PTF2 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 423 | 0.59 | 0.75 | 37 | empty |
| 2 | 79 | 0.42 | 0.79 | 19 | empty |
| 3 | 70 | 0.42 | 0.80 | 19 | empty |
Interfaces
1 interface between chains.
- A–B · 737 Ų buried · 2 hydrogen bonds · protein-protein
Compared structures
- 6RIU · C-terminal domain of TssA protein from T6SS of Vibrio cholerae. · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A023PTF2
- Elsewhere: RCSB PDB 6RIU · PDBe 6RIU · UniProt A0A023PTF2
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