MolNFT v1 · #162755 · protein

Bactofilin from thermus thermophilus, F105R mutant crystal structure

6RIA: “Bactofilin from thermus thermophilus, F105R mutant crystal structure”. X-ray diffraction, 7 pockets (best druggability 0.59). MolNFT v1 #162755 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 6RIA
Type: protein
Length: 2,880 residues
Chains: 32
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Bactofilin
UniProt: Q5SHG1
Pockets: 7 · best druggability 0.59

Structure

x-ray diffraction · 1 distinct chain · 0% helix, 67% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, 1, 2, 3, 4, 5, 6	Bactofilin	protein	90	0% helix, 67% strand	Q5SHG1

Pockets

7 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	310	0.59	0.78	45	empty
2	225	0.57	0.80	34	empty
3	124	0.52	0.82	29	empty
4	162	0.50	0.78	25	empty
5	206	0.50	0.76	38	empty

Interfaces

37 interfaces between chains.

L–T · 804 Å² buried · 20 hydrogen bonds · protein-protein
G–J · 792 Å² buried · 14 hydrogen bonds · protein-protein
B–N · 788 Å² buried · 16 hydrogen bonds · protein-protein
A–D · 783 Å² buried · 18 hydrogen bonds · protein-protein
2–5 · 760 Å² buried · 14 hydrogen bonds · protein-protein

Compared structures

6RIA · Bactofilin from Thermus thermophilus, F105R mutant crystal structure · the same entry in another collection · chain B against B, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q5SHG1
Elsewhere: RCSB PDB 6RIA · PDBe 6RIA · UniProt Q5SHG1

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