MolNFT v1 · #162677 · protein
Photorhabdus laumondii lectin PLL2 in complex with 3-O-methyl-D- glucose
6RG2: “Photorhabdus laumondii lectin PLL2 in complex with 3-O-methyl-D- glucose”. X-ray diffraction, 3 ligands (3MG, ZB1, NA). MolNFT v1 #162677 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6RG2
- Type
- protein
- Length
- 686 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q7N8I8
- Ligands
- 3MG, ZB1, NA
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| B | — | protein | 343 | — | Q7N8I8 |
| A | — | protein | 343 | — | Q7N8I8 |
Ligands and binding sites
- 3MG · 3-O-methyl-beta-D-glucopyranose · ligand · 14 copies · chains B, A
- ZB1 · 3-O-methyl-alpha-D-glucopyranose · ligand · 5 copies · chains B, A
- NA · Sodium ion · metal · 2 copies · chains A
- ACT · Acetate ion · additive · 5 copies · chains B, A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6RG2 · Photorhabdus laumondii lectin PLL2 in complex with 3-O-methyl-D-glucose · the same entry in another collection · chain B against B, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q7N8I8
- Elsewhere: RCSB PDB 6RG2 · PDBe 6RG2 · UniProt Q7N8I8
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