MolNFT v1 · #16266 · DNA + RNA
5'(DCCUCCUU)3':3'(RAGGAGGAAA)5'
1NTQ · 5'-R(*AP*AP*AP*GP*GP*AP*GP*GP*A)-3': “5'(DCCUCCUU)3':3'(RAGGAGGAAA)5'”. Solution nmr. MolNFT v1 #16266 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 1NTQ
- Type
- DNA + RNA
- Length
- 16 nucleotides
- Chains
- 2
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- 5'-R(*AP*AP*AP*GP*GP*AP*GP*GP*A)-3'; 5'-D(*CP*CP*UP*CP*CP*UP*U)-3'
Structure
solution nmr · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 5'-R(*AP*AP*AP*GP*GP*AP*GP*GP*A)-3' | rna | 9 | — | — |
| B | 5'-D(*CP*CP*UP*CP*CP*UP*U)-3' | dna | 7 | — | — |
Interfaces
1 interface between chains.
- A–B · 354 Ų buried · 29 hydrogen bonds · nucleic-nucleic
Compared structures
- 1NTQ · 5'(dCCUCCUU)3':3'(rAGGAGGAAA)5' · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 1NTQ · PDBe 1NTQ
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.