MolNFT v1 · #162622 · protein

Crystal structure of PIZZA6-sh with ZN2+

6REJ: “Crystal structure of PIZZA6-sh with ZN2+”. X-ray diffraction, 2 ligands (ZN, SO4), 1 pocket (best druggability 0.70). MolNFT v1 #162622 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 6REJ
Type: protein
Length: 250 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: PIZZA6-sh
Ligands: ZN, SO4
Pockets: 1 · best druggability 0.70

Structure

x-ray diffraction · 1 distinct chain · 6% helix, 44% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	PIZZA6-sh	protein	250	6% helix, 44% strand	—

Ligands and binding sites

ZN · Zinc ion · metal · 5 copies · chains A
SO4 · Sulfate ion · ion · 3 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	373	0.70	0.82	42	ZN

Compared structures

6REJ · Crystal structure of Pizza6-SH with Zn2+ · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Elsewhere: RCSB PDB 6REJ · PDBe 6REJ

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