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MolNFT v1 · #162543 · protein

Domain C P140 mycoplasma genitalium

6RCC · Adhesin P1: “Domain C P140 mycoplasma genitalium”. X-ray diffraction, 2 ligands (NA, CL). MolNFT v1 #162543 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
6RCC
Type
protein
Length
98 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Adhesin P1
UniProt
P20796
Ligands
NA, CL

Structure

x-ray diffraction · 1 distinct chain · 16% helix, 28% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
XAdhesin P1protein9816% helix, 28% strandP20796

Ligands and binding sites

  • NA · Sodium ion · metal · chains X
  • CL · Chloride ion · ion · chains X

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 6RCC · Domain C P140 Mycoplasma genitalium · the same entry in another collection · chain X against X, TM-score 1.00
  • P20796 · AlphaFold monomer V2.0 prediction for adhesin P1 (P20796) · a predicted model of the same protein · chain X against A, TM-score 0.68

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