MolNFT v1 · #162450 · DNA
A quadruplex hybrid structure with lpp loop orientation and 3 syn residues
6R9K · DNA (25-mer): “A quadruplex hybrid structure with lpp loop orientation and 3 syn residues”. Solution nmr, 1 pocket (best druggability 0.24). MolNFT v1 #162450 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6R9K
- Type
- DNA
- Length
- 25 nucleotides
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- DNA (25-mer)
- Pockets
- 1 · best druggability 0.24
Structure
solution nmr · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA (25-mer) | dna | 25 | — | — |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 51 | 0.24 | 0.73 | 10 | empty |
Modifications
Observed in the structure: 2 modified (nucleotide modification).
Compared structures
- 6R9K · A quadruplex hybrid structure with lpp loop orientation and 3 syn residues · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 6R9K · PDBe 6R9K
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