MolNFT v1 · #162345 · protein
Crystal structure of a class II pyruvate aldolase from sphingomonas wittichii RW1 in complex with hydroxypyruvate
6R62: “Crystal structure of a class II pyruvate aldolase from sphingomonas wittichii RW1 in complex with…”. X-ray diffraction, 5 ligands (3PY, K, MG). MolNFT v1 #162345 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6R62
- Type
- protein
- Length
- 252 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A5VH82
- Ligands
- 3PY, K, MG, NA, BR
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 252 | — | A5VH82 |
Ligands and binding sites
- 3PY · 3-hydroxypyruvic acid · ligand · 2 copies · chains A
- K · Potassium ion · metal · 2 copies · chains A
- MG · Magnesium ion · metal · chains A
- NA · Sodium ion · metal
- BR · Bromide ion · ion · 2 copies · chains A
- ACT · Acetate ion · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6R62 · Crystal structure of a class II pyruvate aldolase from Sphingomonas wittichii RW1 in… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A5VH82
- Elsewhere: RCSB PDB 6R62 · PDBe 6R62 · UniProt A5VH82
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