MolNFT v1 · #162266 · protein

Endo-levanase BT1760 mutant E221A from bacteroides thetaiotaomicron complexed with levantetraose

6R3U · Glycoside hydrolase family 32: “Endo-levanase BT1760 mutant E221A from bacteroides thetaiotaomicron complexed with levantetraose”. X-ray diffraction, 2 ligands (FRU, ZN), 3 pockets (best druggability 0.61). MolNFT v1 #162266 on…

PDB: 6R3U
Type: protein
Length: 495 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Glycoside hydrolase family 32
UniProt: Q8A6W6
Ligands: FRU, ZN
Pockets: 3 · best druggability 0.61

Structure

x-ray diffraction · 1 distinct chain · 4% helix, 49% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Glycoside hydrolase family 32	protein	495	4% helix, 49% strand	Q8A6W6

Ligands and binding sites

FRU · beta-D-fructofuranose · sugar · 4 copies · chains A
ZN · Zinc ion · metal · 2 copies · chains A
GOL · Glycerol · additive · 3 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

3 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	278	0.61	0.79	28	GOL
2	170	0.51	0.78	22	FRU
3	51	0.26	0.74	15	empty

Compared structures

6R3U · Endo-levanase BT1760 mutant E221A from Bacteroides thetaiotaomicron complexed with… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q8A6W6
Elsewhere: RCSB PDB 6R3U · PDBe 6R3U · UniProt Q8A6W6

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