MolNFT v1 · #162202 · protein

Solution structure of sortase a from S. aureus in complex with 2- (aminomethyl)-3-hydroxy-4H-pyran-4-one based prodrug

6R1V: “Solution structure of sortase a from S. aureus in complex with 2- (aminomethyl)-3-hydroxy-4H-pyran-4-one…”. Solution nmr, 1 ligand (JPT). MolNFT v1 #162202 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 6R1V
Type: protein
Length: 148 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: Q2FV99
Ligands: JPT

Structure

solution nmr · 1 distinct chain.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	—	protein	148	—	Q2FV99

Ligands and binding sites

JPT · 6-(hydroxymethyl)-3-oxidanyl-2-(thiophen-3-ylmethyl) pyran-4-one · ligand · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

6R1V · Solution structure of sortase A from S. aureus in complex with… · the same entry in another collection · chain A against A, TM-score 1.00
Q2FV99 · AlphaFold monomer V2.0 prediction for sortase a (Q2FV99) · a predicted model of the same protein · chain A against A, TM-score 0.88

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q2FV99
Elsewhere: RCSB PDB 6R1V · PDBe 6R1V · UniProt Q2FV99

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