MolNFT v1 · #162022 · protein
Crystal structure of kpc-2 complexed with relebactam (16 hour soak)
6QW9: “Crystal structure of kpc-2 complexed with relebactam (16 hour soak)”. X-ray diffraction, 3 ligands (MK7, JJT, SO4). MolNFT v1 #162022 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6QW9
- Type
- protein
- Length
- 268 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q9F663
- Ligands
- MK7, JJT, SO4
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 268 | — | Q9F663 |
Ligands and binding sites
- MK7 · (2S,5R)-1-formyl-N-(piperidin-4-yl)-5-[(sulfooxy) amino]piperidine-2-carboxamide · ligand · chains A
- JJT · (2~{S})-5-azanylidene-2-(piperidin-4-ylcarbamoyl) piperidine-1-carboxylic acid · ligand · chains A
- SO4 · Sulfate ion · ion · 3 copies · chains A
- GOL · Glycerol · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6QW9 · Crystal structure of KPC-2 complexed with relebactam (16 hour soak) · the same entry in another collection · chain A against A, TM-score 1.00
- Q9F663 · AlphaFold monomer V2.0 prediction for carbapenem-hydrolyzing beta- lactamase kpc (Q9F663) · a predicted model of the same protein · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9F663
- Elsewhere: RCSB PDB 6QW9 · PDBe 6QW9 · UniProt Q9F663
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