MolNFT v1 · #161892 · protein
Clpb (dwb and K476C mutant) bound to casein in presence of atpgammas - state kc-2A
6QS7: “Clpb (dwb and K476C mutant) bound to casein in presence of atpgammas - state kc-2A”. Electron microscopy, 3 ligands (AGS, ADP, MG). MolNFT v1 #161892 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6QS7
- Type
- protein
- Length
- 3,627 residues
- Chains
- 7
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P63284
- Ligands
- AGS, ADP, MG
Structure
electron microscopy · 6 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 568 | — | P63284 |
| B | — | protein | 582 | — | P63284 |
| C | — | protein | 630 | — | P63284 |
| D, E | — | protein | 625 | — | P63284 |
| F | — | protein | 573 | — | P63284 |
| S | — | protein | 24 | — | — |
Ligands and binding sites
- AGS · Phosphothiophosphoric acid-adenylate ester · ligand · 10 copies · chains A, F, B, C, D, E
- ADP · Adenosine-5'-diphosphate · ligand · chains E, F
- MG · Magnesium ion · metal · 8 copies · chains A, B, C, D, E
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6QS7 · ClpB (DWB and K476C mutant) bound to casein in presence of ATPgammaS - state KC-2A · the same entry in another collection · chain S against S, TM-score 1.00
- P63284 · AlphaFold monomer V2.0 prediction for chaperone protein clpb (P63284) · a predicted model of the same protein · chain A against A, TM-score 0.79
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P63284
- Elsewhere: RCSB PDB 6QS7 · PDBe 6QS7 · UniProt P63284
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