MolNFT v1 · #161746 · protein

Crystal structure of borrelia (borreliella) burgdorferi outer surface protein BBA69

6QO1 · Putative surface protein: “Crystal structure of borrelia (borreliella) burgdorferi outer surface protein BBA69”. X-ray diffraction, 6 pockets (best druggability 0.84). MolNFT v1 #161746 on GenesisL1: 3D structure, binding sites and…

PDB: 6QO1
Type: protein
Length: 744 residues
Chains: 4
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Putative surface protein
UniProt: O50958
Pockets: 6 · best druggability 0.84

Structure

x-ray diffraction · 1 distinct chain · 78% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, D, B, C	Putative surface protein	protein	186	78% helix, 0% strand	O50958

Pockets

6 pockets found on a 1 Å grid, 5 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	1173	0.84	0.85	108	empty
2	342	0.62	0.79	24	empty
3	460	0.62	0.76	47	empty
4	163	0.56	0.81	20	empty
5	79	0.50	0.84	15	empty

Interfaces

3 interfaces between chains.

D–B · 1024 Å² buried · 22 hydrogen bonds · protein-protein
B–C · 655 Å² buried · 4 hydrogen bonds · protein-protein
A–B · 627 Å² buried · 2 hydrogen bonds · protein-protein

Compared structures

6QO1 · Crystal structure of Borrelia (Borreliella) burgdorferi outer surface protein BBA69 · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt O50958
Elsewhere: RCSB PDB 6QO1 · PDBe 6QO1 · UniProt O50958

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