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MolNFT v1 · #161682 · protein

Cathepsin-K in complex with amino-OXAAZABICYCLO[3.3.0]OCTANYL containing inhibitor

6QM0: “Cathepsin-K in complex with amino-OXAAZABICYCLO[3.3.0]OCTANYL containing inhibitor”. X-ray diffraction, 2 ligands (J6B, MHA). MolNFT v1 #161682 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
6QM0
Type
protein
Length
432 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
P43235
Ligands
J6B, MHA

Structure

x-ray diffraction · 1 distinct chain.

ChainMoleculeTypeResiduesSecondary structureUniProt
A, B—protein216—P43235

Ligands and binding sites

  • J6B · ~{N}-[(2~{S})-1-[(3~{R},3~{A}~{R},6~{R},6~{A}~{R})-6-azanyl-3-oxidanyl-2,3,3~{A},5,6,6~{A}-hexahydrofuro[3, 2-b]pyrrol-4-yl]-4-methyl-1-oxidanylidene-pentan-2-yl]-3-fluoranyl-4-[2-(4-methylpiperazin-1-yl)-1,3-thiazol-4-yl]benzamide · ligand · 2 copies · chains A, B
  • MHA · (carbamoylmethyl-carboxymethyl-amino)-acetic acid · ligand · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 6QM0 · Cathepsin-K in complex with amino-oxaazabicyclo[3.3.0]octanyl containing inhibitor · the same entry in another collection · chain A against A, TM-score 1.00
  • P43235 · AlphaFold monomer V2.0 prediction for cathepsin K (P43235) · a predicted model of the same protein · chain B against A, TM-score 1.00

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