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MolNFT v1 · #161502 · protein

Structure of human BCL-2 in complex with abt-263

6QGH · Apoptosis regulator BCL-2,BCL-2-like protein 1,APOPTOSIS…: “Structure of human BCL-2 in complex with abt-263”. X-ray diffraction, 1 ligand (1XJ), 1 pocket (best druggability 0.60). MolNFT v1 #161502 on GenesisL1: 3D structure…

PDB
6QGH
Type
protein
Length
154 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Apoptosis regulator BCL-2,BCL-2-like protein 1,APOPTOSIS regulator BCL-2,BCL-2-like…
UniProt
P10415, Q07817
Ligands
1XJ
Pockets
1 · best druggability 0.60

Structure

x-ray diffraction · 1 distinct chain · 79% helix, 0% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
AApoptosis regulator BCL-2,BCL-2-like protein 1,APOPTOSIS regulator BCL-2,BCL-2-like protein 1protein15479% helix, 0% strandP10415, Q07817

Ligands and binding sites

  • 1XJ · 4-(4-{[2-(4-chlorophenyl)-5,5-dimethylcyclohex-1-en-1-yl]methyl}piperazin-1-yl)-N-[(4-{[(2R)-4-(morpholin-4-yl)-1-(phenylsulfanyl)butan-2-yl]amino}-3-[(trifluoromethyl)sulfonyl]phenyl)sulfonyl]benzamide · ligand · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
13430.600.77341XJ

Compared structures

  • 6QGH · Structure of human Bcl-2 in complex with ABT-263 · the same entry in another collection · chain A against A, TM-score 1.00
  • P10415 · AlphaFold monomer V2.0 prediction for apoptosis regulator BCL-2 (P10415) · a predicted model of the same protein · chain A against A, TM-score 0.88
  • Q07817 · AlphaFold monomer V2.0 prediction for BCL-2-like protein 1 (Q07817) · a predicted model of the same protein · chain A against A, TM-score 0.88

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