MolNFT v1 · #161264 · protein + RNA
Structure of the standard kink turn hmkt-7 variant A2BM6A bound with AFL7AE protein
6Q8U: “Structure of the standard kink turn hmkt-7 variant A2BM6A bound with AFL7AE protein”. X-ray diffraction, 1 ligand (NA). MolNFT v1 #161264 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6Q8U
- Type
- protein + RNA
- Length
- 286 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- O29494
- Ligands
- NA
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | — | rna | 21 | — | — |
| C, D | — | protein | 122 | — | O29494 |
Ligands and binding sites
- NA · Sodium ion · metal · 10 copies · chains A, D, C, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6Q8U · Structure of the standard kink turn HmKt-7 variant A2bm6A bound with AfL7Ae protein · the same entry in another collection · chain A against A, TM-score 1.00
- O29494 · AlphaFold monomer V2.0 prediction for 50S ribosomal protein L7AE (O29494) · a predicted model of the same protein · chain C against A, TM-score 0.96
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O29494
- Elsewhere: RCSB PDB 6Q8U · PDBe 6Q8U · UniProt O29494
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