MolNFT v1 · #161136 · protein
Crystal structure of a-eudesmol synthase
6Q4S · Pentalenene synthase: “Crystal structure of a-eudesmol synthase”. X-ray diffraction, 1 ligand (CL), 2 pockets (best druggability 0.73). MolNFT v1 #161136 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6Q4S
- Type
- protein
- Length
- 308 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Pentalenene synthase
- EC
- 4.2.3.7
- UniProt
- A0A2N9BKY0
- Ligands
- CL
- Pockets
- 2 · best druggability 0.73
Structure
x-ray diffraction · 1 distinct chain · 73% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Pentalenene synthase (EC 4.2.3.7) | protein | 308 | 73% helix, 0% strand | A0A2N9BKY0 |
Ligands and binding sites
- CL · Chloride ion · ion · 4 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 622 | 0.73 | 0.80 | 50 | CL |
| 2 | 88 | 0.36 | 0.76 | 18 | empty |
Compared structures
- 6Q4S · Crystal structure of a-eudesmol synthase · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A2N9BKY0
- Elsewhere: RCSB PDB 6Q4S · PDBe 6Q4S · UniProt A0A2N9BKY0
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