MolNFT v1 · #160989 · protein
Crystal structure of mura from clostridium difficile, mutation C116D, N the presence of udp-N-acetylmuramic acid
6Q0A: “Crystal structure of mura from clostridium difficile, mutation C116D, N the presence of udp-N-acetylmuramic…”. X-ray diffraction, 1 ligand (EPZ). MolNFT v1 #160989 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6Q0A
- Type
- protein
- Length
- 416 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q18CL1
- Ligands
- EPZ
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 416 | — | Q18CL1 |
Ligands and binding sites
- EPZ · (2R)-2-{[(2R,3R,4R,5S,6R)-3-(acetylamino)-2-{[(S)-{[(R)-{[(2R,3S,4R,5R)-5-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methoxy}(hydroxy) phosphoryl]oxy}(hydroxy)phosphoryl]oxy}-5-hydroxy-6-(hydroxymethyl)tetrahydro-2H-pyran-4-yl]oxy}propanoic acid · ligand · chains A
- EDO · 1,2-ethanediol · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6Q0A · Crystal structure of MurA from Clostridium difficile, mutation C116D, n the presence of… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q18CL1
- Elsewhere: RCSB PDB 6Q0A · PDBe 6Q0A · UniProt Q18CL1
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