MolNFT v1 · #160887 · protein
The crystal structure of chloramphenicol acetyltransferase-like protein from vibrio fischeri ES114 in complex with taurocholic acid
6PXA: “The crystal structure of chloramphenicol acetyltransferase-like protein from vibrio fischeri ES114 in complex…”. X-ray diffraction, 3 ligands (TCH, CL, SO4). MolNFT v1 #160887 on GenesisL1: 3D structure, binding sites and pockets in…
- PDB
- 6PXA
- Type
- protein
- Length
- 2,622 residues
- Chains
- 12
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q5DZD6
- Ligands
- TCH, CL, SO4
Structure
x-ray diffraction · 8 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, J | — | protein | 218 | — | Q5DZD6 |
| B, G, K | — | protein | 220 | — | Q5DZD6 |
| C | — | protein | 219 | — | Q5DZD6 |
| D | — | protein | 215 | — | Q5DZD6 |
| E, I | — | protein | 221 | — | Q5DZD6 |
| F | — | protein | 217 | — | Q5DZD6 |
| H | — | protein | 216 | — | Q5DZD6 |
| L | — | protein | 217 | — | Q5DZD6 |
Ligands and binding sites
- TCH · Taurocholic acid · ligand · 12 copies · chains A, B, C, D, E, F, G, H, I, J, K, L
- CL · Chloride ion · ion · 16 copies · chains A, C, B, D, F, E, G, I, H, J, L, K
- SO4 · Sulfate ion · ion · 4 copies · chains A, B, C, G, H, I, J, L, K
- GOL · Glycerol · additive · 7 copies · chains B, C, D, E, F, H, I
- FMT · Formic acid · additive · 7 copies · chains J, B, K, L
- ACT · Acetate ion · additive · 3 copies · chains A, G
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6PXA · The crystal structure of chloramphenicol acetyltransferase-like protein from Vibrio… · the same entry in another collection · chain E against E, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5DZD6
- Elsewhere: RCSB PDB 6PXA · PDBe 6PXA · UniProt Q5DZD6
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