MolNFT v1 · #160599 · protein
Clpx in clpx-clpp complex bound to substrate and ATP-gamma-S, class 4
6PP5: “Clpx in clpx-clpp complex bound to substrate and ATP-gamma-S, class 4”. Electron microscopy, 2 ligands (AGS, ADP). MolNFT v1 #160599 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6PP5
- Type
- protein
- Length
- 2,075 residues
- Chains
- 7
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A0A1Q9L861
- Ligands
- AGS, ADP
Structure
electron microscopy · 6 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 341 | — | A0A1Q9L861 |
| B, C | — | protein | 352 | — | A0A1Q9L861 |
| D | — | protein | 347 | — | A0A1Q9L861 |
| E | — | protein | 348 | — | A0A1Q9L861 |
| F | — | protein | 323 | — | A0A1Q9L861 |
| S | — | protein | 12 | — | — |
Ligands and binding sites
- AGS · Phosphothiophosphoric acid-adenylate ester · ligand · 5 copies · chains A, B, C, D, E, F
- ADP · Adenosine-5'-diphosphate · ligand · chains F
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6PP5 · ClpX in ClpX-ClpP complex bound to substrate and ATP-gamma-S, class 4 · the same entry in another collection · chain B against B, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A1Q9L861
- Elsewhere: RCSB PDB 6PP5 · PDBe 6PP5 · UniProt A0A1Q9L861
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