MolNFT v1 · #160349 · protein
Crystal structure of marinobacter subterrani acetylpolyamine amidohydrolase (msapah) complexed with 5-[(3-aminopropyl) AMINO]PENTYLBORONIC acid
6PHT: “Crystal structure of marinobacter subterrani acetylpolyamine amidohydrolase (msapah) complexed with…”. X-ray diffraction, 4 ligands (OKP, K, MG). MolNFT v1 #160349 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6PHT
- Type
- protein
- Length
- 1,376 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A0A0J7JFD7
- Ligands
- OKP, K, MG, ZN
Structure
x-ray diffraction · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 346 | — | A0A0J7JFD7 |
| B, C | — | protein | 343 | — | A0A0J7JFD7 |
| D | — | protein | 344 | — | A0A0J7JFD7 |
Ligands and binding sites
- OKP · {5-[(3-aminopropyl)amino]pentyl}boronic acid · ligand · 4 copies · chains A, B, D, C
- K · Potassium ion · metal · 8 copies · chains A, B, C, D
- MG · Magnesium ion · metal · 5 copies · chains A, B, C, D
- ZN · Zinc ion · metal · 4 copies · chains A, B, C, D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6PHT · Crystal structure of Marinobacter subterrani acetylpolyamine amidohydrolase (msAPAH)… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A0J7JFD7
- Elsewhere: RCSB PDB 6PHT · PDBe 6PHT · UniProt A0A0J7JFD7
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