MolNFT v1 · #160070 · protein
E.COLI lpxa in complex with compound 1
6P9P · Acyl-[acyl-carrier-protein]--udp-N-acetylglucosamine O…: “E.COLI lpxa in complex with compound 1”. X-ray diffraction, 2 ligands (O5J, PO4). MolNFT v1 #160070 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6P9P
- Type
- protein
- Length
- 263 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Acyl-[acyl-carrier-protein]--udp-N-acetylglucosamine O- acyltransferase
- EC
- 2.3.1.129
- UniProt
- W9AB79
- Ligands
- O5J, PO4
Structure
x-ray diffraction · 1 distinct chain · 17% helix, 30% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Acyl-[acyl-carrier-protein]--udp-N-acetylglucosamine O- acyltransferase (EC 2.3.1.129) | protein | 263 | 17% helix, 30% strand | W9AB79 |
Ligands and binding sites
- O5J · 3-[2-(4-methoxyphenyl)-2-oxoethyl]-5,5-diphenylimidazolidine-2,4-dione · ligand · chains A
- PO4 · Phosphate ion · ion · 2 copies · chains A
- DMS · Dimethyl sulfoxide · additive · 3 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6P9P · E.coli LpxA in complex with Compound 1 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt W9AB79
- Elsewhere: RCSB PDB 6P9P · PDBe 6P9P · UniProt W9AB79
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.