MolNFT v1 · #160001 · protein
Crystal structure of unsaturated fatty acid bound wild-type toxt from vibrio cholerae strain SCE256
6P7R · Toxin co-regulated pilus virulence regulatory protein: “Crystal structure of unsaturated fatty acid bound wild-type toxt from vibrio cholerae strain SCE256”. X-ray diffraction, 1 ligand (PAM), 3 pockets (best druggability 0.78).…
- PDB
- 6P7R
- Type
- protein
- Length
- 277 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Toxin co-regulated pilus virulence regulatory protein
- UniProt
- Q9F5Q9
- Ligands
- PAM
- Pockets
- 3 · best druggability 0.78
Structure
x-ray diffraction · 1 distinct chain · 42% helix, 22% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Toxin co-regulated pilus virulence regulatory protein | protein | 277 | 42% helix, 22% strand | Q9F5Q9 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 386 | 0.78 | 0.87 | 42 | PAM |
| 2 | 102 | 0.44 | 0.79 | 19 | empty |
| 3 | 77 | 0.40 | 0.79 | 21 | empty |
Compared structures
- 6P7R · Crystal structure of unsaturated fatty acid bound wild-type ToxT from Vibrio cholerae… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9F5Q9
- Elsewhere: RCSB PDB 6P7R · PDBe 6P7R · UniProt Q9F5Q9
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