GL1X · GenesisL1 explorer

MolNFT v1 · #159799 · protein

Copper-bound pcuac domain from PMOF2

6P1G · Copper chaperone PCU(A)C: “Copper-bound pcuac domain from PMOF2”. X-ray diffraction, 2 ligands (CU, ZN), 1 pocket (best druggability 0.36). MolNFT v1 #159799 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
6P1G
Type
protein
Length
244 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Copper chaperone PCU(A)C
UniProt
A0A2D2CWX5
Ligands
CU, ZN
Pockets
1 · best druggability 0.36

Structure

x-ray diffraction · 2 distinct chains · 0% helix, 60% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
ACopper chaperone PCU(A)Cprotein1270% helix, 58% strandA0A2D2CWX5
BCopper chaperone PCU(A)Cprotein1170% helix, 62% strandA0A2D2CWX5

Ligands and binding sites

  • CU · Copper (II) ion · metal · 2 copies · chains A, B
  • ZN · Zinc ion · metal · 2 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
11110.360.7424empty

Interfaces

1 interface between chains.

  • A–B · 711 Ų buried · 13 hydrogen bonds · protein-protein

Compared structures

  • 6P1G · Copper-bound PCuAC domain from PmoF2 · the same entry in another collection · chain A against A, TM-score 1.00

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