MolNFT v1 · #159518 · protein
Crystal structure of bos taurus MXRA8 ectodomain
6ORT · Matrix remodeling-associated protein 8: “Crystal structure of bos taurus MXRA8 ectodomain”. X-ray diffraction, 1 ligand (CL), 1 pocket (best druggability 0.43). MolNFT v1 #159518 on GenesisL1: 3D structure, binding sites and pockets…
- PDB
- 6ORT
- Type
- protein
- Length
- 277 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Matrix remodeling-associated protein 8
- UniProt
- Q148M6
- Ligands
- CL
- Pockets
- 1 · best druggability 0.43
Structure
x-ray diffraction · 1 distinct chain · 12% helix, 48% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Matrix remodeling-associated protein 8 | protein | 277 | 12% helix, 48% strand | Q148M6 |
Ligands and binding sites
- CL · Chloride ion · ion · 3 copies · chains A
- EPE · 4-(2-hydroxyethyl)-1-piperazine ethanesulfonic acid · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 99 | 0.43 | 0.78 | 23 | empty |
Modifications
Observed in the structure: 3 disulfide (disulfide).
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q148M6
- Elsewhere: RCSB PDB 6ORT · PDBe 6ORT · UniProt Q148M6
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