MolNFT v1 · #159505 · protein
Crystal structure of SEL1 repeat protein from oxalobacter formigenes
6ORC: “Crystal structure of SEL1 repeat protein from oxalobacter formigenes”. X-ray diffraction, 2 pockets (best druggability 0.65). MolNFT v1 #159505 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6ORC
- Type
- protein
- Length
- 267 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- SEL1 repeat protein
- UniProt
- C3X8T0
- Pockets
- 2 · best druggability 0.65
Structure
x-ray diffraction · 2 distinct chains · 75% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | SEL1 repeat protein | protein | 133 | 74% helix, 0% strand | C3X8T0 |
| B | SEL1 repeat protein | protein | 134 | 75% helix, 0% strand | C3X8T0 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 450 | 0.65 | 0.78 | 65 | empty |
| 2 | 117 | 0.39 | 0.74 | 16 | empty |
Interfaces
1 interface between chains.
- A–B · 562 Ų buried · 12 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 8 modified (engineered).
Compared structures
- 6ORC · Crystal structure of Sel1 repeat protein from Oxalobacter formigenes · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt C3X8T0
- Elsewhere: RCSB PDB 6ORC · PDBe 6ORC · UniProt C3X8T0
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