MolNFT v1 · #159504 · protein
Full-length S. pombe MDN1 in the presence of ATP and rbin-1
6ORB · Midasin: “Full-length S. pombe MDN1 in the presence of ATP and rbin-1”. Electron microscopy, 20 pockets (best druggability 0.80). MolNFT v1 #159504 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6ORB
- Type
- protein
- Length
- 3,352 residues
- Chains
- 1
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Midasin
- UniProt
- O94248
- Pockets
- 20 · best druggability 0.80
Structure
electron microscopy · 1 distinct chain · 58% helix, 4% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Midasin | protein | 3352 | 58% helix, 4% strand | O94248 |
Pockets
20 pockets found on a 1 Å grid, 20 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1185 | 0.80 | 0.82 | 127 | empty |
| 2 | 632 | 0.78 | 0.84 | 106 | empty |
| 3 | 903 | 0.77 | 0.80 | 116 | empty |
| 4 | 669 | 0.75 | 0.81 | 81 | empty |
| 5 | 620 | 0.75 | 0.82 | 91 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O94248
- Elsewhere: RCSB PDB 6ORB · PDBe 6ORB · UniProt O94248
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