MolNFT v1 · #159484 · protein
E. COLI ATP synthase ADP state 1A
6OQR: “E. COLI ATP synthase ADP state 1A”. Electron microscopy, 4 ligands (ATP, ADP, MG). MolNFT v1 #159484 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6OQR
- Type
- protein
- Length
- 4,849 residues
- Chains
- 22
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A0A073H3T8, A0A073FQ32, D6IFY0, S1HQ43, J7RYJ3, A0A192CEZ8, F4TL55, C3SL77
- Ligands
- ATP, ADP, MG, PO4
Structure
electron microscopy · 12 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| W | — | protein | 173 | — | A0A073H3T8 |
| C | — | protein | 512 | — | A0A073FQ32 |
| B | — | protein | 511 | — | A0A073FQ32 |
| A | — | protein | 508 | — | A0A073FQ32 |
| X, Y | — | protein | 156 | — | D6IFY0 |
| H | — | protein | 136 | — | S1HQ43 |
| G | — | protein | 284 | — | J7RYJ3 |
| F | — | protein | 458 | — | A0A192CEZ8 |
| E, D | — | protein | 460 | — | A0A192CEZ8 |
| J, L, M, N, O, P, Q, I, S | — | protein | 77 | — | F4TL55 |
| R | — | protein | 76 | — | F4TL55 |
| a | — | protein | 266 | — | C3SL77 |
Ligands and binding sites
- ATP · Adenosine-5'-triphosphate · ligand · 3 copies · chains C, F, B, E, A, D
- ADP · Adenosine-5'-diphosphate · ligand · 3 copies · chains B, F, E, C, D
- MG · Magnesium ion · metal · 5 copies · chains C, B, A, F, D
- PO4 · Phosphate ion · ion · chains C, D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6OQR · E. coli ATP Synthase ADP State 1a · the same entry in another collection · chain W against W, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A073H3T8
- Every structure of UniProt A0A073FQ32
- Every structure of UniProt D6IFY0
- Every structure of UniProt S1HQ43
- Every structure of UniProt J7RYJ3
- Every structure of UniProt A0A192CEZ8
- Every structure of UniProt F4TL55
- Every structure of UniProt C3SL77
- Elsewhere: RCSB PDB 6OQR · PDBe 6OQR · UniProt A0A073H3T8 · UniProt A0A073FQ32 · UniProt D6IFY0 · UniProt S1HQ43 · UniProt J7RYJ3 · UniProt A0A192CEZ8 · UniProt F4TL55 · UniProt C3SL77
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