MolNFT v1 · #159416 · protein

PROTEIN C

6OOQ · Multidrug transporter mdfa: “PROTEIN C”. X-ray diffraction, 1 ligand (DXC), 1 pocket (best druggability 0.78). MolNFT v1 #159416 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 6OOQ
Type: protein
Length: 392 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Multidrug transporter mdfa
UniProt: A0A1E5MBX7
Ligands: DXC
Pockets: 1 · best druggability 0.78

Structure

x-ray diffraction · 1 distinct chain · 76% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Multidrug transporter mdfa	protein	392	76% helix, 0% strand	A0A1E5MBX7

Ligands and binding sites

DXC · (3alpha,5beta,12alpha)-3,12-dihydroxycholan-24-oic acid · ligand · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	1190	0.78	0.79	69	DXC

Compared structures

6OOQ · protein C · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt A0A1E5MBX7
Elsewhere: RCSB PDB 6OOQ · PDBe 6OOQ · UniProt A0A1E5MBX7

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