MolNFT v1 · #159415 · protein

PROTEIN B

6OOP · Multidrug transporter mdfa: “PROTEIN B”. X-ray diffraction, 2 ligands (KHJ, PR), 1 pocket (best druggability 0.80). MolNFT v1 #159415 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 6OOP
Type: protein
Length: 392 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Multidrug transporter mdfa
UniProt: A0A1E5MBX7
Ligands: KHJ, PR
Pockets: 1 · best druggability 0.80

Structure

x-ray diffraction · 1 distinct chain · 86% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Multidrug transporter mdfa	protein	392	86% helix, 0% strand	A0A1E5MBX7

Ligands and binding sites

KHJ · 1,1'-dimethyl-4,4'-bipyridin-1-ium · ligand · chains A
PR · Praseodymium ion · metal · 2 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	1195	0.80	0.82	74	KHJ

Compared structures

6OOP · protein B · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt A0A1E5MBX7
Elsewhere: RCSB PDB 6OOP · PDBe 6OOP · UniProt A0A1E5MBX7

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