MolNFT v1 · #158796 · protein

Structure of HLA-A2:01 with peptide MM91

6O4Y: “Structure of HLA-A2:01 with peptide MM91”. X-ray diffraction, 1 ligand (NA). MolNFT v1 #158796 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 6O4Y
Type: protein
Length: 382 residues
Chains: 3
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: U5YJM1, P61769
Ligands: NA

Structure

x-ray diffraction · 3 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	—	protein	274	—	U5YJM1
B	—	protein	99	—	P61769
C	—	protein	9	—	—

Ligands and binding sites

NA · Sodium ion · metal · 4 copies · chains A, C
GOL · Glycerol · additive · 3 copies · chains A, B, C

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

6O4Y · Structure of HLA-A2:01 with peptide MM91 · the same entry in another collection · chain A against A, TM-score 1.00
P61769 · AlphaFold monomer V2.0 prediction for beta-2-microglobulin (P61769) · a predicted model of the same protein · chain B against A, TM-score 0.98

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt U5YJM1
Every structure of UniProt P61769
Elsewhere: RCSB PDB 6O4Y · PDBe 6O4Y · UniProt U5YJM1 · UniProt P61769

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