MolNFT v1 · #158627 · protein

Dextranase aodex KQ11

6NZS: “Dextranase aodex KQ11”. X-ray diffraction, 5 pockets (best druggability 0.56). MolNFT v1 #158627 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 6NZS
Type: protein
Length: 587 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Dextranase
EC: 3.2.1.11
Pockets: 5 · best druggability 0.56

Structure

x-ray diffraction · 1 distinct chain · 7% helix, 43% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Dextranase (EC 3.2.1.11)	protein	587	7% helix, 43% strand	—

Pockets

5 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	303	0.56	0.76	34	empty
2	70	0.44	0.82	16	empty
3	63	0.35	0.78	17	empty
4	53	0.34	0.78	16	empty
5	57	0.31	0.76	23	empty

Modifications

Observed in the structure: 2 disulfide (disulfide).

Compared structures

6NZS · Dextranase AoDex KQ11 · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Elsewhere: RCSB PDB 6NZS · PDBe 6NZS

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