MolNFT v1 · #158584 · protein
Crystal structure of computationally designed protein XAX_GGDQ
6NYK · Design construct XAX_GGDQ: “Crystal structure of computationally designed protein XAX_GGDQ”. X-ray diffraction. MolNFT v1 #158584 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6NYK
- Type
- protein
- Length
- 271 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Design construct XAX_GGDQ
Structure
x-ray diffraction · 3 distinct chains · 90% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Design construct XAX_GGDQ | protein | 91 | 90% helix, 0% strand | — |
| B | Design construct XAX_GGDQ | protein | 90 | 91% helix, 0% strand | — |
| C | Design construct XAX_GGDQ | protein | 90 | 88% helix, 0% strand | — |
Interfaces
3 interfaces between chains.
- A–C · 1309 Ų buried · 6 hydrogen bonds · protein-protein
- B–C · 1277 Ų buried · 5 hydrogen bonds · protein-protein
- A–B · 1253 Ų buried · 5 hydrogen bonds · protein-protein
Compared structures
- 6NYK · Crystal structure of computationally designed protein XAX_GGDQ · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 6NYK · PDBe 6NYK
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