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MolNFT v1 · #158373 · protein

Crystal structure of human caspase-4

6NRY: “Crystal structure of human caspase-4”. X-ray diffraction, 1 pocket (best druggability 0.65). MolNFT v1 #158373 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
6NRY
Type
protein
Length
245 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Caspase-4
EC
3.4.22.57
UniProt
P49662
Pockets
1 · best druggability 0.65

Structure

x-ray diffraction · 1 distinct chain · 34% helix, 20% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
ACaspase-4 (EC 3.4.22.57)protein24534% helix, 20% strandP49662

Ligands and binding sites

  • GOL · Glycerol · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
11810.650.8631empty

Compared structures

  • 6NRY · Crystal structure of human caspase-4 · the same entry in another collection · chain A against A, TM-score 1.00
  • P49662 · AlphaFold monomer V2.0 prediction for caspase-4 (P49662) · a predicted model of the same protein · chain A against A, TM-score 0.94

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