MolNFT v1 · #158368 · protein
Crystal structure of DPR11 IG1 bound to dip-gamma IG+IG2
6NRR: “Crystal structure of DPR11 IG1 bound to dip-gamma IG+IG2”. X-ray diffraction, 4 ligands (NAG, BMA, FUC). MolNFT v1 #158368 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6NRR
- Type
- protein
- Length
- 294 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q8MRE6, Q9VAR6
- Ligands
- NAG, BMA, FUC, SO4
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 95 | — | Q8MRE6 |
| B | — | protein | 199 | — | Q9VAR6 |
Ligands and binding sites
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 2 copies · chains B
- BMA · beta-D-mannopyranose · sugar · chains B
- FUC · alpha-L-fucopyranose · sugar · chains B
- SO4 · Sulfate ion · ion · 4 copies · chains A, B
- GOL · Glycerol · additive · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6NRR · Crystal structure of Dpr11 IG1 bound to DIP-gamma IG+IG2 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8MRE6
- Every structure of UniProt Q9VAR6
- Elsewhere: RCSB PDB 6NRR · PDBe 6NRR · UniProt Q8MRE6 · UniProt Q9VAR6
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