MolNFT v1 · #158320 · protein
Crystal structure of a peptidase from an aci-B1 actinobacterium
6NQC · Cyanophycinase-like exopeptidase: “Crystal structure of a peptidase from an aci-B1 actinobacterium”. X-ray diffraction, 1 ligand (SO4), 2 pockets (best druggability 0.37). MolNFT v1 #158320 on GenesisL1: 3D structure, binding sites…
- PDB
- 6NQC
- Type
- protein
- Length
- 244 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Cyanophycinase-like exopeptidase
- UniProt
- J9H630
- Ligands
- SO4
- Pockets
- 2 · best druggability 0.37
Structure
x-ray diffraction · 1 distinct chain · 33% helix, 23% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Cyanophycinase-like exopeptidase | protein | 244 | 33% helix, 23% strand | J9H630 |
Ligands and binding sites
- SO4 · Sulfate ion · ion · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 76 | 0.37 | 0.77 | 19 | empty |
| 2 | 51 | 0.26 | 0.73 | 14 | empty |
Compared structures
- 6NQC · Crystal structure of a peptidase from an acI-B1 Actinobacterium · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt J9H630
- Elsewhere: RCSB PDB 6NQC · PDBe 6NQC · UniProt J9H630
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.