MolNFT v1 · #158304 · protein

SSU72/SYMPK in complex with SER2/SER5 phosphorylated peptide

6NPW: “SSU72/SYMPK in complex with SER2/SER5 phosphorylated peptide”. X-ray diffraction, 1 ligand (PO4). MolNFT v1 #158304 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 6NPW
Type: protein
Length: 1,041 residues
Chains: 5
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: Q8MSU4, Q9VWE4
Ligands: PO4

Structure

x-ray diffraction · 4 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	—	protein	332	—	Q8MSU4
B, D	—	protein	192	—	Q9VWE4
C	—	protein	320	—	Q8MSU4
E	—	protein	5	—	—

Ligands and binding sites

PO4 · Phosphate ion · ion · chains B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

6NPW · SSu72/Sympk in complex with Ser2/Ser5 phosphorylated peptide · the same entry in another collection · chain B against B, TM-score 1.00
Q8MSU4 · AlphaFold monomer V2.0 prediction for symplekin (Q8MSU4) · a predicted model of the same protein · chain A against A, TM-score 0.99

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q8MSU4
Every structure of UniProt Q9VWE4
Elsewhere: RCSB PDB 6NPW · PDBe 6NPW · UniProt Q8MSU4 · UniProt Q9VWE4

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