MolNFT v1 · #158236 · protein
Crystal structure of mycobacterium tuberculosis dethiobiotin synthetase in complex with fragment analogue 4
6NNZ: “Crystal structure of mycobacterium tuberculosis dethiobiotin synthetase in complex with fragment analogue 4”. X-ray diffraction, 3 ligands (KUD, KUG, SO4). MolNFT v1 #158236 on GenesisL1: 3D structure, binding sites and pockets in…
- PDB
- 6NNZ
- Type
- protein
- Length
- 907 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P9WPQ5
- Ligands
- KUD, KUG, SO4
Structure
x-ray diffraction · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, C | — | protein | 227 | — | P9WPQ5 |
| B | — | protein | 226 | — | P9WPQ5 |
| D | — | protein | 227 | — | P9WPQ5 |
Ligands and binding sites
- KUD · [(1S,2R)-2-(benzenecarbonyl)cyclopentyl]acetic acid · ligand · 4 copies · chains A, B, C, D
- KUG · [(1R,2S)-2-(benzenecarbonyl)cyclopentyl]acetic acid · ligand · 4 copies · chains A, B, C, D
- SO4 · Sulfate ion · ion · 8 copies · chains A, B, C, D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6NNZ · Crystal structure of Mycobacterium tuberculosis dethiobiotin synthetase in complex with… · the same entry in another collection · chain D against D, TM-score 1.00
- P9WPQ5 · AlphaFold monomer V2.0 prediction for dethiobiotin synthetase biod (P9WPQ5) · a predicted model of the same protein · chain B against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P9WPQ5
- Elsewhere: RCSB PDB 6NNZ · PDBe 6NNZ · UniProt P9WPQ5
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