MolNFT v1 · #158232 · protein
Pd-L1 igv domain complex with macro-cyclic peptide
6NNV: “Pd-L1 igv domain complex with macro-cyclic peptide”. X-ray diffraction, 2 ligands (ACE, NH2). MolNFT v1 #158232 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6NNV
- Type
- protein
- Length
- 540 residues
- Chains
- 8
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q9NZQ7
- Ligands
- ACE, NH2
Structure
x-ray diffraction · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 119 | — | Q9NZQ7 |
| B, D | — | protein | 121 | — | Q9NZQ7 |
| C | — | protein | 123 | — | Q9NZQ7 |
| I, J, K, L | — | protein | 14 | — | — |
Ligands and binding sites
- ACE · Acetyl group · ligand · 4 copies · chains B, I, A, J, C, K, D, L
- NH2 · Amino group · ion · 4 copies · chains I, J, K, L
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6NNV · PD-L1 IgV domain complex with macro-cyclic peptide · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9NZQ7
- Elsewhere: RCSB PDB 6NNV · PDBe 6NNV · UniProt Q9NZQ7
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