MolNFT v1 · #158178 · protein + RNA
Cryoem structure of the LBCAS12A-crrna-ACRVA4 dimer
6NM9: “Cryoem structure of the LBCAS12A-crrna-ACRVA4 dimer”. Electron microscopy, 1 ligand (MG). MolNFT v1 #158178 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6NM9
- Type
- protein + RNA
- Length
- 2,690 residues
- Chains
- 6
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A0A0U2APF4, A0A182DWE3
- Ligands
- MG
Structure
electron microscopy · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, C | — | protein | 115 | — | A0A0U2APF4 |
| B, D | — | protein | 1205 | — | A0A182DWE3 |
| G, E | — | rna | 25 | — | — |
Ligands and binding sites
- MG · Magnesium ion · metal · 4 copies · chains A, G, B, C, E, D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6NM9 · CryoEM structure of the LbCas12a-crRNA-AcrVA4 dimer · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A0U2APF4
- Every structure of UniProt A0A182DWE3
- Elsewhere: RCSB PDB 6NM9 · PDBe 6NM9 · UniProt A0A0U2APF4 · UniProt A0A182DWE3
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