MolNFT v1 · #158106 · protein
Electron cryo-microscopy of chikungunya vlp
6NK5: “Electron cryo-microscopy of chikungunya vlp”. Electron microscopy, 1 ligand (NAG). MolNFT v1 #158106 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6NK5
- Type
- protein
- Length
- 4,035 residues
- Chains
- 12
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q5XXP3
- Ligands
- NAG
Structure
electron microscopy · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, C, D | — | protein | 439 | — | Q5XXP3 |
| E, F, G, H | — | protein | 419 | — | Q5XXP3 |
| I | — | protein | 150 | — | Q5XXP3 |
| J, K, L | — | protein | 151 | — | Q5XXP3 |
Ligands and binding sites
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 8 copies · chains A, E, B, F, C, G, D, H
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6NK5 · Electron Cryo-Microscopy Of Chikungunya VLP · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5XXP3
- Elsewhere: RCSB PDB 6NK5 · PDBe 6NK5 · UniProt Q5XXP3
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