MolNFT v1 · #157803 · protein
MERS-cov complex with human neutralizing LCA60 antibody Fab fragment (state 1)
6NB3: “MERS-cov complex with human neutralizing LCA60 antibody Fab fragment (state 1)”. Electron microscopy, 3 ligands (NAG, MAN, BMA). MolNFT v1 #157803 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6NB3
- Type
- protein
- Length
- 3,757 residues
- Chains
- 7
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A0A140AYW5
- Ligands
- NAG, MAN, BMA
Structure
electron microscopy · 5 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, C | — | protein | 1169 | — | A0A140AYW5 |
| L, E | — | protein | 107 | — | — |
| H | — | protein | 124 | — | — |
| D | — | protein | 123 | — | — |
| B | — | protein | 958 | — | A0A140AYW5 |
Ligands and binding sites
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 93 copies · chains A, C, H, B, D
- MAN · alpha-D-mannopyranose · sugar · 37 copies · chains A, L, C, B, D, E
- BMA · beta-D-mannopyranose · sugar · 30 copies · chains A, H, B, C
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6NB3 · MERS-CoV complex with human neutralizing LCA60 antibody Fab fragment (state 1) · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A140AYW5
- Elsewhere: RCSB PDB 6NB3 · PDBe 6NB3 · UniProt A0A140AYW5
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