MolNFT v1 · #157669 · protein
Crystal structure of [fefe]-hydrogenase in the presence of 7 mm sodium dithionite
6N6P: “Crystal structure of [fefe]-hydrogenase in the presence of 7 mm sodium dithionite”. X-ray diffraction, 3 ligands (SF4, 402, FES). MolNFT v1 #157669 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6N6P
- Type
- protein
- Length
- 573 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P29166
- Ligands
- SF4, 402, FES
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 573 | — | P29166 |
Ligands and binding sites
- SF4 · Iron/sulfur cluster · ligand · 4 copies · chains A
- 402 · dicarbonyl[bis(cyanide-kappaC)]-mu-(iminodimethanethiolatato-1kappaS:2kappaS)-mu-(oxomethylidene)diiron(2+) · ligand · chains A
- FES · Fe2/s2 (inorganic) cluster · ligand · chains A
- GOL · Glycerol · additive · 2 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6N6P · Crystal structure of [FeFe]-hydrogenase in the presence of 7 mM Sodium dithionite · the same entry in another collection · chain A against A, TM-score 1.00
- P29166 · AlphaFold monomer V2.0 prediction for iron hydrogenase 1 (P29166) · a predicted model of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P29166
- Elsewhere: RCSB PDB 6N6P · PDBe 6N6P · UniProt P29166
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