MolNFT v1 · #157551 · protein

Beta-lactamase from chitinophaga pinensis

6N36: “Beta-lactamase from chitinophaga pinensis”. X-ray diffraction, 1 ligand (ZN), 1 pocket (best druggability 0.36). MolNFT v1 #157551 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 6N36
Type: protein
Length: 265 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Beta-lactamase
EC: 3.5.2.6
UniProt: C7PJE6
Ligands: ZN
Pockets: 1 · best druggability 0.36

Structure

x-ray diffraction · 1 distinct chain · 31% helix, 22% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Beta-lactamase (EC 3.5.2.6)	protein	265	31% helix, 22% strand	C7PJE6

Ligands and binding sites

ZN · Zinc ion · metal · 2 copies · chains A
EDO · 1,2-ethanediol · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	69	0.36	0.77	17	ZN

Compared structures

6N36 · Beta-lactamase from Chitinophaga pinensis · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt C7PJE6
Elsewhere: RCSB PDB 6N36 · PDBe 6N36 · UniProt C7PJE6

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