MolNFT v1 · #157531 · protein

Lon protease aaa+ domain

6N2I · DNA-binding ATP-dependent protease la: “Lon protease aaa+ domain”. X-ray diffraction, 1 ligand (ADP), 2 pockets (best druggability 0.52). MolNFT v1 #157531 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 6N2I
Type: protein
Length: 338 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: DNA-binding ATP-dependent protease la
EC: 3.4.21.53
UniProt: A0A376KCZ4
Ligands: ADP
Pockets: 2 · best druggability 0.52

Structure

x-ray diffraction · 1 distinct chain · 36% helix, 10% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	DNA-binding ATP-dependent protease la (EC 3.4.21.53)	protein	338	36% helix, 10% strand	A0A376KCZ4

Ligands and binding sites

ADP · Adenosine-5'-diphosphate · ligand · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	185	0.52	0.78	25	ADP
2	101	0.48	0.81	24	empty

Compared structures

6N2I · Lon protease AAA+ domain · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt A0A376KCZ4
Elsewhere: RCSB PDB 6N2I · PDBe 6N2I · UniProt A0A376KCZ4

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