MolNFT v1 · #157503 · protein
Crystal structure of fumarate hydratase class II from legionella pneumophila philadelphia 1
6N1M: “Crystal structure of fumarate hydratase class II from legionella pneumophila philadelphia 1”. X-ray diffraction, 1 ligand (SO4), 3 pockets (best druggability 0.32). MolNFT v1 #157503 on GenesisL1: 3D structure, binding sites and…
- PDB
- 6N1M
- Type
- protein
- Length
- 466 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Fumarate hydratase class II
- EC
- 4.2.1.2
- UniProt
- Q5ZRE5
- Ligands
- SO4
- Pockets
- 3 · best druggability 0.32
Structure
x-ray diffraction · 1 distinct chain · 60% helix, 8% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Fumarate hydratase class II (EC 4.2.1.2) | protein | 466 | 60% helix, 8% strand | Q5ZRE5 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
3 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 76 | 0.32 | 0.74 | 13 | empty |
| 2 | 60 | 0.31 | 0.75 | 17 | empty |
| 3 | 67 | 0.30 | 0.74 | 15 | EDO |
Compared structures
- 6N1M · Crystal structure of Fumarate hydratase class II from Legionella pneumophila Philadelphia… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5ZRE5
- Elsewhere: RCSB PDB 6N1M · PDBe 6N1M · UniProt Q5ZRE5
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